PUBLICATIONS


Role of homocysteine in aortic calcification and osteogenic cell differentiation

Atherosclerosis, 2008, Vol. Article in Press ()

Authors: Ann Van Campenhout, Corey S. Moran, Adam Parr, Paula Clancy, Catherine Rush, Hieronim Jakubowski, and Jonathan Golledge

Age and gender related differences in human parotid gland gene expression

Archives of Oral Biology, 2008, Vol. Article in Press ()

Authors: Alaka Srivastava, Jianghua Wang, Hui Zhou, and James E. Melvin

Involvement of connective tissue growth factor (CTGF) in insulin-like growth factor-I (IGF1) stimulation of proliferation of a bovine mammary epitheli

Journal of Domestic Animal Endocrinology, 2008, Vol. 35 (2): 180-189

Authors: Yinli Zhou, Anthony V. Capuco and Honglin Jiang

Transcriptional profile of right ventricular tissue during acute pulmonary embolism in rats

Physiol. Genomics, 2008, Vol. 34: 101-111. ()

Authors: John Zagorski, Nina Sanapareddy, Michael A. Gellar, Jeffrey A. Kline, and John A. Watts

Zinc Deficiency Alters DNA Damage Response Genes in Normal Human Prostate Epithelial Cells 1–3

J. Nutr., 2008, Vol. 138 (): 667-673

Authors: Michelle Yan, Yang Song, Carmen P. Wong, Karin Hardin and Emily Ho

Identification of molecular pathways affected by pterostilbene, a natural dimethylether analog of resveratrol

BMC Medical Genomics, 2008, Vol. 1 (): 7

Authors: Zhiqiang Pan, Ameeta K Agarwal, Tao Xu, Qin Feng, Scott R Baerson, Stephen O Duke and Agnes M Rimando

Effects of extracellular matrix and neighboring cells on induction of human embryonic stem cells into retinal or retinal pigment epithelial progenitor

Experimental Eye Research, 2008, Vol. 86 (6): 957-965

Authors: Jie Gong, Ofer Sagiv, Hui Cai, Stephen H. Tsang, and Lucian V. Del Priore

Gluclose sensing by MondoA:Mlx complexes: A role for hexokinases and direct regulation of thioredoxin-interacting protein expression

PNAS, 2008, Vol. 105 (19): 6912-6917

Authors: Carrie A. Stoltzman, Christopher W. Peterson, Kevin T. Breen, Deborah M. Muoio, Andrew N. Billin, and Donald E. Ayer

Epigenetic inheritance based evolution of antibiotic resistance in bacteria

BMC Evolutionary Biology, 2008, Vol. 8 (): 52

Authors: Mike Adam, Bhuvana Murali, Nicole O Glenn and S Steven Potter

Cigarette smoke induces genetic instability in airway epithelial cells by suppressing FANCD2 expression

British Journal of Cancer, 2008, Vol. 98 (): 1653–1661

Authors: L E Hays, D M Zodrow, J E Yates, M E Deffebach, D B Jacoby, S B Olson, J F Pankow and G C Bagby

Systematic Determination of Differential Gene Expression in the Primate Corpus Luteum During the Luteal Phase of the Menstrual Cycle

Molecular Endocrinology, 2008, Vol. 22 (5): 1260-1273

Authors: Randy L. Bogan, Melinda J. Murphy, Richard L. Stouffer, and Jon D. Hennebold

Alteration in the activation state of new inflammation-associated targets by phospholipase A2-activating protein (PLAA)

Cellular Signalling, 2008, Vol. 20 (5): 844-861

Authors: Fan Zhang, Jian Sha, Thomas G. Wood, Cristi L. Galindo, Harold R. Garner, Mark F. Burkart, Giovanni Suarez, Johanna C. Sierra, Stacy L. Agar, Johnny W. Peterson and Ashok K. Chopra

Doxycycline Attenuates Isoproterenol- and Transverse Aortic Banding-Induced Cardiac Hypertrophy in Mice

JPET, 2008, Vol. 324 (): 1196-1203

Authors: Mounir Errami, Cristi L. Galindo, Amina T. Tassa, John M. DiMaio, Joseph A. Hill, and Harold R. Garner

IL-22 mediates mucosal host defense against Gram-negative bacterial pneumonia

Nature Medicine, 2008, Vol. 14 (): 275-281

Authors: Shean J Aujla, Yvonne R Chan, Mingquan Zheng, Mingjian Fei, David J Askew, Derek A Pociask, Todd A Reinhart, Florencia McAllister, Jennifer Edeal, Kristi Gaus, Shahid Husain, James L Kreindler, Patricia J Dubin, Joseph M Pilewski, Mike M Myerburg, Carol A

Gene expression patterns of bovine perimuscular preadipocytes during adipogenesis

Biochemical and Biophysical Research Communications, 2008, Vol. 366 (2): 346-351

Authors: Masaaki Taniguchi, Le Luo Guan, Bing Zhang, Michael V. Dodson, Erasmus Okine and Stephen S. Moore

Increasing {alpha}-7-{beta}-1-integrin promotes muscle cell proliferation, adhesion, and resistance to apoptosis without changing gene expression

Am J Physiol Cell Physiol, 2008, Vol. 294 (): C627-C640

Authors: Jianming Liu, Dean J. Burkin, and Stephen J. Kaufman

Hepatocyte nuclear factor-4{alpha} promotes differentiation of intestinal epithelial cells in a coculture system

Am J Physiol Gastrointest Liver Physiol, 2008, Vol. 294 (): G418-G428

Authors: Carine R. Lussier, Jean-Philippe Babeu, Benoît A. Auclair, Nathalie Perreault, and François Boudreau

Hypoxia selects for androgen independent LNCaP cells with a more malignant geno- and phenotype

International Journal of Cancer, 2008, Vol. 123 (4): 760-768

Authors: Karl T. Butterworth, Helen O. McCarthy, Andrea Devlin, Louise Ming, Tracy Robson, Stephanie R. McKeown, Jenny Worthington

A Role for Altered Microtubule Polymer Levels in Vincristine Resistance of Childhood Acute Lymphoblastic Leukemia Xenografts

JPET, 2008, Vol. 324 (): 434-442

Authors: Vivienna Ong, Natalia L. M. Liem, Michael A. Schmid, Nicole M. Verrills, Rachael A. Papa, Glenn M. Marshall, Karen L. MacKenzie, Maria Kavallaris, and Richard B. Lock

Regulation of Motility by the ExpR/Sin Quorum-Sensing System in Sinorhizobium meliloti

Journal of Bacteriology, 2008, Vol. 190 (3): 861-871

Authors: Hanh H. Hoang, Nataliya Gurich, and Juan E. González

Maternal infection leads to abnormal gene regulation and brain atrophy in mouse offspring: Implications for genesis of neurodevelopmental disorders

Schizophrenia Research, 2008, Vol. 99 (1-3): 56-70

Authors: S. Hossein Fatemi, Teri J. Reutiman, Timothy D. Folsom, Hao Huang, Kenichi Oishi, Susumu Mori, Donald F. Smee, David A. Pearche, Christine Winter, Reinhard Sohr, Georg Juckel

Deciphering the lithium transcriptome: Microarray profiling of lithium-modulated gene expression in human neuronal cells

Neuroscience, 2008, Vol. 151 (4): 1184-1197

Authors: R.S. Seelan, A. Khalyfa, J. Lakshmanan, M.F. Casanova, and R.N. Parthasarathy

Genomic and proteomic analysis of the effects of cannabinoids on normal human astrocytes

Brain Research, 2008, Vol. 1191 (): 1-11

Authors: B. Bindukumar, S.D. Mahajan, J.L. Reynolds, Z. Hub, D.E. Sykes, R. Aalinkeel and S.A. Schwartz,

Microarray analysis of hepatic gene expression in pyrazole-mediated hepatotoxicity: Identification of potential stimuli of Cyp2a5 induction

Biochemical Pharmacology, 2008, Vol. 75 (2): 538-551

Authors: Kathleen D. Nichols and Gordon M. Kirby

Precancerous model of human breast epithelial cells induced by NNK for prevention

Breast Cancer Research and Treatment, 2008, Vol. 109 (3): 427-441

Authors: Nalin Siriwardhana, Shambhunath Choudhary and Hwa-Chain Robert Wang

Normal Neurogenesis but Abnormal Gene Expression in Human Fragile X Cortical Progenitor Cells

Stem Cells and Development, 2008, Vol. 17 (1): 107-118

Authors: Anita Bhattacharyya, Erin McMillan, Kyle Wallace, Thomas C. Tubon, Jr., Elizabeth E. Capowski, Clive N. Svendsen.

The histone deacetylase inhibitor belinostat (PXD101) suppresses bladder cancer cell growth in vitro and in vivo

J Transl Med, 2007, Vol. 5 (): 49

Authors: Michael T Buckley, Joanne Yoon, Herman Yee, Luis Chiriboga, Leonard Liebes, Gulshan Ara, Xiaozhong Qian, Dean F Bajorin, Tung-Tien Sun, Xue-Ru Wu, and Iman Osman

Initial testing (stage 1) of the BH3 mimetic ABT-263 by the pediatric preclinical testing program

Pediatric Blood & Cancer, 2007, Vol. 50 (6): 1181-1189

Authors: Richard Lock, PhD, Herman Richard Lock, PhD, Hernan Carol, PhD, Peter J. Houghton, PhD, Christopher L. Morton, BS, E. Anders Kolb, MD, Richard Gorlick, MD, C. Patrick Reynolds, MD, PhD, John M. Maris, MD, Stephen T. Keir, PhD, Jianrong Wu, PhD, Malcolm A.

Changes in the Transcriptional Profile of Cardiac Myocytes Following Green Fluorescent Protein Expression

DNA and Cell Biology, 2007, Vol. 26 (10): 727-736

Authors: Bahareh Badrian, Marie A. Bogoyevitch

Identification of glucocorticoid-regulated genes that control cell proliferation during murine respiratory development

J Physiol, 2007, Vol. 585 (1): 187-201

Authors: Anthony D. Bird, Kheng H. Tan, P. Fredrik Olsson, Malgorzata Zieba, Sharon J. Flecknoe, Douglas R. Liddicoat, Richard Mollard, Stuart B. Hooper and Timothy J. Cole

Gene Expression Analyses of Human Mesenchymal Stem Cells Cultured in Osteogenic Differentiation Medium for 3, 7, 14 and 21 Days by Genome Focus DNA Mi

Journal of Oral Tissue Engineering, 2007, Vol. 5 (1): 35-47

Authors: Masayuki TAIRA, Naoyuki CHOSA, Kaori SASAKI, Setsuo SAITOH, Takashi NEZU, Nobuko SATO and Yoshima ARAKI

Selective repression of retinoic acid target genes by RIP140 during induced tumor cell differentiation of pluripotent human embryonal carcinoma cells

Mol Cancer, 2007, Vol. 6 (): 57

Authors: Kelly C Heim, Kristina A White, Dexin Deng, Craig R Tomlinson, Jason H Moore, Sarah J Freemantle, and Michael J Spinella

Differential Gene Expression of Primary Cultured Lymphatic and Blood Vascular Endothelial Cells

Neoplasia, 2007, Vol. 9 (12): 1038–1045

Authors: Gregory M Nelson, Timothy P Padera, Igor Garkavtsev, Toshi Shioda, and Rakesh K Jain

Gene expression analysis of zebrafish retinal ganglion cells during optic nerve regeneration identifies KLF6a and KLF7a as important regulators of axo

Developmental Biology, 2007, Vol. 312 (2): 596-612

Authors: Matthew B. Veldman, Michael A. Bemben, Robert C. Thompson, and Daniel Goldman

Serpin Peptidase Inhibitor Clade A Member 1 as a Potential Marker for Malignancy in Insulinomas

Clinical Cancer Research, 2007, Vol. 13 (): 5322-5330

Authors: Sandra Valéria de Sá, Maria Lúcia Corręa-Giannella, Márcio Carlos Machado, Karin Krogh, Madson Queiroz de Almeida, Maria Adelaide Albergaria Pereira, Sheila Aparecida Coelho Siqueira, Rosely Antunes Patzina, Felícia Satie Ibuki, Mari Cleide Sogayar, Marce

Microarray profile of seizure damage-refractory hippocampal CA3 in a mouse model of epileptic preconditioning

The Journal of Neuroscience, 2007, Vol. 150 (2): 467-477

Authors: S. Hatazaki, C. Bellver-Estelles, E.M. Jimenez-Mateos, R. Meller, C. Bonner, N. Murphy, S. Matsushima, W. Taki, J.H.M. Prehn, R.P. Simon and D.C. Henshall

Mediator Subunit Med28 (Magicin) is a repressor of smooth muscle cell differentiation

JBC, 2007, Vol. Manuscript M706592200 ()

Authors: Kim S. Beyer, Roberta L. Beauchamp, Ming-Fen Lee, James F. Gusella, Anders M. Näär, and Vijaya Ramesh

Is Autotaxin (ENPP2) the Link between Hepatitis C and Hepatocellular Cancer?

Journal of Gastrointestinal Surgery, 2007, Vol. 11 (2): 1628-1635

Authors: Amanda B. Cooper, Jianmin Wu, Debao Lu, and Mary A. Maluccio

The Wip1 Phosphatase Acts as a Gatekeeper in the p53-Mdm2 Autoregulatory Loop

Cancer Cell, 2007, Vol. 12 (4): 342-354

Authors: Xiongbin Lu, Ou Ma, Thuy-Ai Nguyen, Stephen N. Jones, Moshe Oren and Lawrence A. Donehower

Induction of heme oxygenase-1 by cobalt protoporphyrin enhances the antitumour effect of bortezomib in adult T-cell leukaemia cells

British Journal of Cancer, 2007, Vol. 97 (): 1099-1105

Authors: R S Hamamura, J H Ohyashiki, R Kurashina1, C Kobayashi, Y Zhang, T Takaku and K Ohyashiki

Assist Devices Fail to Reverse Patterns of Fetal Gene Expression Despite Beta-Blockers

The Journal of Heart and Lung Transplantation, 2007, Vol. 26 (11): 1170-1176

Authors: Brian D. Lowes MD, Ronald Zolty MD, Simon F. Shakar MD, Andreas Brieke MD, Norman Gray MD, Michael Reed MD, Mihail Calalb MD, Wayne Minobe, JoAnn Lindenfeld MD, Eugene E. Wolfel MD, Mark Geraci MD, Michael R. Bristow MD, PhD and Joseph Cleveland Jr MD

Targeting Fatty Acid Biosynthesis for the Development of Novel Chemotherapeutics against Mycobacterium tuberculosis: Evaluation of A-Ring-Modified Dip

Antimicrobial Agents and Chemotherapy, 2007, Vol. 51 (10): 3562-3567

Authors: Melissa E. Boyne, Todd J. Sullivan, Christopher W. Amende, Hao Lu, Veronica Gruppo, Darragh Heaslip, Anita G. Amin, Delphi Chatterjee, Anne Lenaerts, Peter J. Tonge, and Richard A. Slayden

A C. elegans Myc-like network cooperates with semaphorin and Wnt signaling pathways to control cell migration

Developmental Biology, 2007, Vol. Volume 310 (2): 226-239

Authors: Christopher L. Pickett, Kevin T. Breen, and Donald E. Ayer

An early requirement for maternal FoxH1 during zebrafish gastrulation

Developmental Biology, 2007, Vol. 310 (1): 10-22

Authors: Wuhong Pei, Houtan Noushmehr, Justin Costa, Maia V. Ouspenskaia, Abdel G. Elkahloun and Benjamin Feldman

Competing Interactions between Micro-RNAs Determine Neural Progenitor Survival and Proliferation after Ethanol Exposure: Evidence from an Ex Vivo Mode

The Journal of Neuroscience, 2007, Vol. 27 (32): 8546-8557

Authors: Pratheesh Sathyan, Honey B. Golden, and Rajesh C. Miranda

Innate immunity and transcription of MGAT-III and Toll-like receptors in Alzheimer's disease patients are improved by bisdemethoxycurcumin

PNAS, 2007, Vol. 104 (31): 12849-12854

Authors: Milan Fiala, Philip T. Liu, Araceli Espinosa-Jeffrey, Mark J. Rosenthal, George Bernard, John M. Ringman, James Sayre, Laura Zhang, Justin Zaghi, Sheila Dejbakhsh, Ben Chiang, James Hui, Michelle Mananian, Anita Baghaee, Pamela Hong, and John Cashman

Functional genomics of chicken, mouse, and human titin supports splice diversity as an important mechanism for regulating biomechanics of striated mus

Am J Physiol Regul Integr Comp Physiol., 2007, Vol. 293 (2): R557-67

Authors: Henk Granzier, Michael Radke, Joseph Royal, Yiming Wu, Thomas C. Irving, Michael Gotthardt, and Siegfried Labeit

Dissection of a genetic locus influencing renal function in the rat and its concordance with kidney disease loci on human chromosome 1q21

Physiological Genomics, 2007, Vol. 30 (): 332-334

Authors: Michael R. Garrett, William T. Gunning, Tracy Radecki and Arti Richard

Pheochromocytomas in Nf1 knockout mice express a neural progenitor gene expression profile

Journal of Neuroscience, 2007, Vol. 147 (4): 928-937

Authors: J.F. Powers, M.J. Evinger, J. Zhi, K.L. Picard, and A.S. Tischler

Laser Capture Microdissection-Microarray Analysis of Focal Segmental Glomerulosclerosis Glomeruli

Nephron Exp Nephrol, 2007, Vol. 107 (): e30-e40

Authors: Michael R. Bennett, Kimberly A. Czech, Lois J. Arend, David P. Witte, Prasad Devarajan, S. Steven Potter

Genes misregulated in C. elegans deficient in Dicer, RDE-4, or RDE-1 are enriched for innate immunity genes

RNA, 2007, Vol. RNA (): 1090-1102

Authors: Noah C. Welker, Jeffrey W. Habig, and Brenda L. Bass

The effect of cardiac ischemic preconditioning on rat left ventricular gene expression profile

Cell Biochemistry and Function, 2007, Vol. 26 (2): 179-184

Authors: Halit Canatan

Laser capture-microarray analysis of Lim1 mutant kidney development

Genesis: The Journal of Genetics and Development, 2007, Vol. 46 (7): 432-439

Authors: S. Steven Potter, Heather A. Hartman, Kin M. Kwan, Richard R. Behringer, Larry T. Patterson

Identification of an Orphan Response Regulator Required for the Virulence of Francisella spp. and Transcription of Pathogenicity Island Genes

Infection and Immunity, 2007, Vol. 75 (7): 3305-3314

Authors: Nrusingh P. Mohapatra, Shilpa Soni, Brian L. Bell, Richard Warren, Robert K. Ernst, Artur Muszynski, Russell W. Carlson, and John S. Gunn

RECOGNITION OF HYALURONAN RELEASED IN STERILE INJURY INVOLVES A UNIQUE RECEPTOR COMPLEX DEPENDENT ON TLR4, CD44 AND MD-2

JBC, 2007, Vol. Manuscript M606352200 ()

Authors: Kristen R. Taylor, Kenshi Yamasaki, Katherine A. Radek, Anna Di Nardo, Heidi Goodarzi, Douglas Golenbock, Bruce Beutler and Richard L. Gallo

Recognition of Hyaluronan Released in Sterile Injury Involves a Unique Receptor Complex Dependent on Toll-like Receptor 4, CD44, and MD-2

J. Biol. Chem., 2007, Vol. 282 (25): 18265-18275

Authors: Kristen R. Taylor, Kenshi Yamasaki, Katherine A. Radek, Anna Di Nardo, Heidi Goodarzi, Douglas Golenbock, Bruce Beutler, and Richard L. Gallo

Transcriptional Activation of Interferon-Stimulated Genes but Not of Cytokine Genes after Primary Infection of Rhesus Macaques with Dengue Virus Type

Clinical and Vaccine Immunology, 2007, Vol. 14 (6): 756-766

Authors: Carlos A. Sariol, Jorge L. Muńoz-Jordán, Kristina Abel, Lymarie C. Rosado, Petraleigh Pantoja, Luis Giavedoni, Idia Vanessa Rodriguez, Laura J. White, Melween Martínez, Teresa Arana, and Edmundo N. Kraiselburd

A role for cell sex in stem cell-mediated skeletal muscle regeneration: female cells have higher muscle regeneration efficiency

The Journal of Cell Biology, 2007, Vol. 177 (1): 73-86

Authors: Bridget M. Deasy, Aiping Lu, Jessica C. Tebbets, Joseph M. Feduska, Rebecca C. Schugar, Jonathan B. Pollett, Bin Sun, Kenneth L. Urish1, Burhan M. Gharaibeh, Baohong Cao, Robert T. Rubin, and Johnny Huard

Comparative gene expression analysis of a chronic myelogenous leukemia cell line resistant to cyclophosphamide using oligonucleotide arrays and respon

Leukemia Research, 2007, Vol. 31 (11): 1511-1520

Authors: Fei Bao, Paula Polk, Mary L. Nordberg, Diana M. Veillon, Amanda Sun, Michael Deininger, David Murray, Borje S. Andersson and Reinhold Munker

Inflammation-induced preconditioning in the immature brain

Seminars in Fetal and Neonatal Medicine, 2007, Vol. 12 (4): 280-286

Authors: Carina Mallard and Henrik Hagberg

Synergistic Effect of Cyclin D1 and c-Myc Leads to More Aggressive and Invasive Mammary Tumors in Severe Combined Immunodeficient Mice

Cancer Research, 2007, Vol. 67 (8): 3698-3707

Authors: Yong Wang, Archana Thakur, Yuan Sun, Jack Wu, Hector Biliran, Aliccia Bollig and D. Joshua Liao

Global transcriptional responses of wild-type Aeromonas hydrophila and its virulence-deficient mutant in a murine model of infection

The Journal of Microbial Pathogenesis, 2007, Vol. 96 (5): 401-413

Authors: Amin A. Fadl, Cristi L. Galindo, Jian Sha, Fan Zhang, Harold R. Garner, Hui-Qun Wang and Ashok K. Chopra

Mutant V600E BRAF Increases Hypoxia Inducible Factor-1(alpha) Expression in Melanoma

Cancer Research, 2007, Vol. 67 (7): 3177-3184

Authors: Suresh M. Kumar, Hong Yu, Robin Edwards, Lianjun Chen, Steven Kazianis, Patricia Brafford, Geza Acs, Meenhard Herlyn and Xiaowei Xu

High Copper Selectively Alters Lipid Metabolism and Cell Cycle Machinery in the Mouse Model of Wilson Disease

J. Biol. Chem., 2007, Vol. 282 (11): 8343-8355

Authors: Dominik Huster, Tina D. Purnat, Jason L. Burkhead, Martina Ralle, Oliver Fiehn, Franziska Stuckert, N. Erik Olson, Daniel Teupser, and Svetlana Lutsenko

The aryl hydrocarbon receptor agonist 3,3′,4,4′,5-pentachlorobiphenyl induces distinct patterns of gene expression between hepatoma and gl

NeuroToxicology, 2007, Vol. 28 (3): 594-612

Authors: Mark S.V. Maier, Marie E. Legare and William H. Hanneman

Non-human primate fetal kidney transcriptome analysis indicates mammalian target of rapamycin (mTOR) is a central nutrient-responsive pathway

J Physiol., 2007, Vol. 579 (3): 643-656

Authors: Mark J. Nijland, Natalia E. Schlabritz-Loutsevitch, Gene B. Hubbard, Peter W. Nathanielsz and Laura A. Cox

Global Gene Expression in the Developing Rat Brain After Hypoxic Preconditioning: Involvement of Apoptotic Mechanisms

Pediatric Research, 2007, Vol. 61 (4): 444-450

Authors: GUSTAVSSON, MALIN; WILSON, MARY ANN; MALLARD, CARINA; ROUSSET, CATHERINE; JOHNSTON, MICHAEL V.; HAGBERG, HENRIK

Identification and functional signature of genes regulated by structurally different ABL kinase inhibitors

Oncogene, 2007, Vol. 26 (26): 4179-4188

Authors: K Nunoda, T Tauchi, T Takaku, S Okabe, D Akahane, G Sashida, J H Ohyashiki and K Ohyashiki

Asbestos-Induced Peribronchiolar Cell Proliferation and Cytokine Production Are Attenuated in Lungs of Protein Kinase C-{delta} Knockout Mice

American Journal of Pathology, 2007, Vol. 170 (1): 140-151

Authors: Arti Shukla, Karen M. Lounsbury, Trisha F. Barrett, Joanna Gell, Mercedes Rincon, Kelly J. Butnor, Douglas J. Taatjes, Gerald S. Davis, Pamela Vacek, Keiichi I. Nakayama, Keiko Nakayama, Chad Steele and Brooke T. Mossman

Apoptosis-inducing factor is a major contributor to neuronal loss induced by neonatal cerebral hypoxia-ischemia

Cell Death and Differentiation, 2007, Vol. 14 (): 775-784

Authors: C Zhu, X Wang, Z Huang, L Qiu, F Xu, N Vahsen, M Nilsson, P S Eriksson, H Hagberg, C Culmsee, N Plesnila, G Kroemer, and K Blomgren

Gene expression profiling reveals complex changes following MEK-EE expression in cardiac myocytes

The International Journal of Biochemistry & Cell Biology, 2007, Vol. 39 (2): 349-365

Authors: Bahareh Badriana and Marie A. Bogoyevitch

Chronic exposure to fulvestrant promotes overexpression of the c-Met receptor in breast cancer cells: implications for tumour-stroma interactions

Endocrine-Related Cancer, 2006, Vol. 13 (4): 1085-1099

Authors: Stephen Hiscox, Nicola J Jordan, Wen Jiang, Maureen Harper, Richard McClelland, Chris Smith and Robert I Nicholson

SK-NEP-1 and Rh1 are Ewing family tumor lines

Pediatric Blood & Cancer, 2006, Vol. 50 (3): 703-706

Authors: Malcolm A. Smith, MD, PhD, Christopher L. Morton, B.S., Doris Phelps, B.S., Kevin Girtman, B.S., Geoffrey Neale, PhD, Peter J. Houghton, PhD

Lipid defect underlies selective skin barrier impairment of an epidermal-specific deletion of Gata-3

JCB, 2006, Vol. 175 (4): 661-670

Authors: Cristina de Guzman Strong, Philip W. Wertz, Chenwei Wang, Fan Yang, Paul S. Meltzer, Thomas Andl, Sarah E. Millar, I-Cheng Ho, Sung-Yun Pai, and Julia A. Segre

Transcriptome analysis of fetal metatarsal long bones by microarray, as a model for endochondral bone formation

The Journal of Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 2006, Vol. 1763 (10): 1031-1039

Authors: Rachael V. Sugars,Elerin Kärner, Ulrika Petersson, Bernhard Ganss and Mikael Wendel

The dynamics of the LPS triggered inflammatory response of murine microglia under different culture and in vivo conditions

Journal of Neuroimmunology, 2006, Vol. 180 (1-2): 71-87

Authors: Sřren Lund, Kenneth Vielsted Christensen, Maj Hedtjärn, Anne Louise Mortensen, Henrik Hagberg, Jeppe Falsig, Henrik Hasseldam, André Schrattenholz, Peter Pörzgen and Marcel Leist

Importance of dosage standardization for interpreting transcriptomal signature profiles: Evidence from studies of xenoestrogens

PNAS, 2006, Vol. 103 (32): 12033-12038

Authors: Toshi Shioda, Jessica Chesnes, Kathryn R. Coser, Lihua Zou, Jingyung Hur, Kathleen L. Dean, Carlos Sonnenschein, Ana M. Soto, and Kurt J. Isselbacher

EFFECT OF CPB ON RAT RENAL GENE EXPRESSION AND BLOOD FLOW

Canadian Journal of Anesthesia, 2006, Vol. 53 (Supplement 1): 26477

Authors: Peter Darby, MD PhD, Francoise Briet, PhD, Alana Harrington, HBSc, Gregory Hare and David Mazer, MD

Cultured lymphocytes from autistic children and non-autistic siblings up-regulate heat shock protein RNA in response to thimerosal challenge

Journal of NeuroToxicology, 2006, Vol. 27 (5): 685-692

Authors: Stephen J. Walker, Jeffrey Segal and Michael Aschner

Rpr1, a gene required for Rpg1-dependent resistance to stem rust in barley

TAG Theoretical and Applied Genetics, 2006, Vol. 113 (5): 847-855

Authors: L. Zhang, T. Fetch, J. Nirmala, D. Schmierer, R. Brueggeman, B. Steffenson and A. Kleinhofs

The Microarray Data Analysis Process: Translating Raw Data Into Biologically Significant Discoveries

American Biotechnology Laboratory, 2006, Vol. 24 (7): 28

Authors: Dr. Pamela Bean

Hepatic gene expression profile associated with non-alcoholic steatohepatitis protection by S-nitroso-N-acetylcysteine in ob/ob mice

Journal of Hepatology, 2006, Vol. 45 (5): 725-733

Authors: Claudia Pinto Marques Souza de Oliveira, José Tadeu Stefano, Vicęncia Mara Rodrigues de Lima, Sandra Valéria de Sá, Fernanda Ibanez Simplicio, Evandro Sobrosa de Mello, Maria Lúcia Corręa-Giannella, Venâncio Avancini Ferreira Alves, Francisco Rafael Marti

MondoA-Mlx Heterodimers Are Candidate Sensors of Cellular Energy Status: Mitochondrial Localization and Direct Regulation of Glycolysis

Molecular and Cellular Biology, 2006, Vol. 26 (13): 4863-4871

Authors: Christopher L. Sans, Daniel J. Satterwhite, Carrie A. Stoltzman, Kevin T. Breen, and Donald E. Ayer

Glutathione-S-transferase expression in the brain: possible role in ethanol preference and longevity

The FASEB Journal, 2006, Vol. 20 (11): 1826-1835

Authors: K. Björk, S. T. Saarikoski, C. Arlinde, L. Kovanen, D. Osei-Hyiaman, M. Ubaldi, M. Reimers, P. Hyytiä, M. Heilig and W. H. Sommer

Effect of Lipopolysaccharide on Global Gene Expression in the Immature Rat Brain

Pediatric Research, 2006, Vol. 60 (2): 161-168

Authors: EKLIND, SASKIA; HAGBERG, HENRIK; WANG, XIAOYANG; SÄVMAN, KARIN; LEVERIN, ANNA-LENA; HEDTJÄRN, MAJ; MALLARD, CARINA

Is Being Plastic Fantastic? Mechanisms of Altered Plasticity after Developmental Traumatic Brain Injury

Dev Neurosci, 2006, Vol. 28 (): 364-379

Authors: Christopher C. Giza, Mayumi L. Prins

Functional Gene Expression Analysis Uncovers Phenotypic Switch in Aggressive Uveal Melanomas

Cancer Research, 2006, Vol. 66 (9): 4602-4609

Authors: Michael D. Onken, Justis P. Ehlers, Lori A. Worley, Jun Makita, Yoshifumi Yokota and J. William Harbour

CXCR3+CD4+ T Cells Mediate Innate Immune Function in the Pathophysiology of Liver Ischemia/Reperfusion Injury1

The Journal of Immunology, 2006, Vol. 176 (10): 6313-6322

Authors: Yuan Zhai, Xiu-da Shen, Wayne W. Hancock, Feng Gao, Bo Qiao, Charles Lassman, John A. Belperio, Robert M. Strieter, Ronald W. Busuttil and Jerzy W. Kupiec-Weglinski

Effect of 30 per cent maternal nutrient restriction from 0.16 to 0.5 gestation on fetal baboon kidney gene expression

J Physiol., 2006, Vol. 572 (Pt 1): 67-85

Authors: L A Cox, M J Nijland, J S Gilbert, N E Schlabritz-Loutsevitch, G B Hubbard, T J McDonald, R E Shade, and P W Nathanielsz

Gene expression profile of human trabecular meshwork cells in response to long-term dexamethasone exposure

Molecular Vision, 2006, Vol. 12 (): 125-141

Authors: Frank W. Rozsa, David M. Reed, Kathleen M. Scott, Hemant Pawar, Sayoko E. Moroi, Theresa Guckian Kijek, Charles M. Krafchak, Mohammad I. Othman, Douglas Vollrath, Victor M. Elner, Julia E. Richards

Gene expression profile differences in left and right liver lobes from mid-gestation fetal baboons: a cautionary tale

J Physiol., 2006, Vol. 572 (Pt 1): 59-66

Authors: Laura A Cox, Natalia Schlabritz-Loutsevitch, Gene B Hubbard, Mark J Nijland, Thomas J McDonald, and Peter W Nathanielsz

Adaptive Islet-Specific Regulatory CD4 T Cells Control Autoimmune Diabetes and Mediate the Disappearance of Pathogenic Th1 Cells In Vivo

The Journal of Immunology, 2006, Vol. 176 (8): 4730-4739

Authors: Sarah E. Weber, Judith Harbertson, Elana Godebu, Guthrie A. Mros, Ryan C. Padrick, Bryan D. Carson, Steven F. Ziegler and Linda M. Bradley

miR-122 regulation of lipid metabolism revealed by in vivo antisense targeting

Cell Metabolism, 2006, Vol. 3 (2): 87-98

Authors: Christine Esau, Scott Davis, Susan F. Murray, Xing Xian Yu, Sanjay K. Pandey, Michael Pear, Lynnetta Watts, Sheri L. Booten, Mark Graham, Robert McKay, Amuthakannan Subramaniam, Stephanie Propp, Bridget A. Lollo, Susan Freier, C. Frank Bennett, Sanjay Bha

Transcriptional up-regulation of MMP12 and MMP13 by asbestos occurs via a PKC-dependent pathway in murine lung

The FASEB Journal, 2006, Vol. 20 (7): 997-999

Authors: Arti Shukla, Trisha F. Barrett, Keiichi I. Nakayama, Kieko Nakayama, Brooke T. Mossman and Karen M. Lounsbury

Transcriptional profiling of Epstein-Barr virus (EBV) genes and host cellular genes in nasal NK/T-cell lymphoma and chronic active EBV infection

British Journal of Cancer, 2006, Vol. 94 (4): 599-608

Authors: Y Zhang, J H Ohyashiki, T Takaku, N Shimizu and K Ohyashiki

Hepatocellular carcinoma in Txnip-deficient mice

Oncogene, 2006, Vol. 25 (25): 3528-3536

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Overexpression of the ZIP1 zinc transporter induces an osteogenic phenotype in mesenchymal stem cells

Bone, 2006, Vol. 38 (2): 181-198

Authors: Zhihui Tang, Surasri Nandan Sahu, Mohammed Abdul Khadeer, Guang Bai, Renty B. Franklin and Anandarup Gupta

Influence of sex on gene expression in the mouse lacrimal gland

Experimental Eye Research, 2006, Vol. 82 (1): 13-23

Authors: Stephen M. Richards, Roderick V. Jensen, Meng Liu, Benjamin D. Sullivan, Michael J. Lombardi, Patricia Rowley, Frank Schirra, Nathaniel S. Treister, Tomo Suzuki, Rebecca J. Steagall, Hiroko Yamagami and David A. Sullivan

Bystander effect: Biological endpoints and microarray analysis

Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, 2006, Vol. 597 (1-2): 98-112

Authors: M. Ahmad Chaudhry

Metallothionein Isoform 3 Gene Is Differentially Expressed in Corticotropin-Producing Pituitary Adenomas

Neuroendocrinology, 2005, Vol. 82 (3-4): 208-214

Authors: R.R. Giorgi, M.L.C. Correa-Giannella, A.P.M. Casarini, M.C. Machado, M.D. Bronstein, V.A. Cescato, D. Giannella-Neto

SW-620 cells treated with topoisomerase I inhibitor SN-38: gene expression profiling

Journal of Translational Medicine, 2005, Vol. 3 (1): 44

Authors: Vinicius Souza, Yan Bin Dong, H Sam Zhou, Wolfgang Zacharias, and Kelly M McMasters

Heregulin Induces Glial Cell Line-derived Neurotrophic Growth Factor-independent, Non-branching Growth and Differentiation of Ureteric Bud Epithelia

J. Biol. Chem., 2005, Vol. 280 (51): 42181-42187

Authors: Hiroyuki Sakurai, Kevin T. Bush, and Sanjay K. Nigam

Expressed sequence tag analysis of zebrafish eye tissues for NEIBank

Molecular Vision, 2005, Vol. 11 (a127): 1083-1100

Authors: Thomas S. Vihtelic, James M. Fadool, James Gao, Kimberley A. Thornton, David R. Hyde, Graeme Wistow

Androgen Control of Gene Expression in the Mouse Meibomian Gland

Investigative Opthalmology and Visual Science, 2005, Vol. 46 (10): 3666-3675

Authors: Frank Schirra, Tomo Suzuki, Stephen M. Richards, Roderick V. Jensen, Meng Liu, Michael J. Lombardi, Patricia Rowley, Nathaniel S. Treister, and David A. Sullivan

Influence of Androgens on Gene Expression in the BALB/c Mouse Submandibular Gland

J Dent Res, 2005, Vol. 84 (12): 1187-1192

Authors: N.S. Treister, S.M. Richards, T. Suzuki, R.V. Jensen, and D.A. Sullivan

Global Transcriptional Profiling of Shewanella oneidensis MR-1 during Cr(VI) and U(VI) Reduction

Applied and Environmental Microbiology, 2005, Vol. 71 (11): 7453-7460

Authors: Rizlan Bencheikh-Latmani, Sarah Middleton Williams, Lisa Haucke, Craig S. Criddle, Liyou Wu, Jizhong Zhou, and Bradley M. Tebo

Gene Expression differences over a critical period of afferent-dependent neuron survival in the mouse auditory brainstem

The Journal of Comparative Neurology, 2005, Vol. 493 (3): 460-474

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Gene expression profiling in response to the histone deacetylase inhibitor BL1521 in neuroblastoma

Experimental Cell Research, 2005, Vol. 309 (2): 451-467

Authors: Annemieke J.M. de Ruijter, Rutger J. Meinsma, Peter Bosma, Stephan Kemp, Huib N. Caron and André B.P. van Kuilenburg

Cocaine increases human immunodeficiency virus type 1 neuroinvasion through remodeling brain microvascular endothelial cells

Journal of Neurovirology, 2005, Vol. 11 (3): 281-291

Authors: Milan Fiala, Amy J. Eshleman, John Cashman, Justin Lin, Albert S. Lossinsky, Vannina Suarez, Wendy Yang, Jun Zhang, Waldemar Popik, Elyse Singer, Francesco Chiappelli, Eva Carro, Martin Weinand, Marlys Witte, James Arthos

Radiation-induced gene expression profile of human cells deficient in 8-hydroxy-2-deoxyguanine glycosylase

International Journal of Cancer, 2005, Vol. 118 (3): 633-642

Authors: M. Ahmad Chaudhry

Androgen regulation of gene expression in the mouse lacrimal gland

The Journal of Steroid Biochemistry and Molecular Biology, 2005, Vol. 96 (5): 401-413

Authors: Stephen M. Richards, Meng Liu, Roderick V. Jensen, Frank Schirra, Hiroko Yamagami, Michael J. Lombardi, Patricia Rowley, Nathaniel S. Treister, Tomo Suzuki, Benjamin D. Sullivan and David A. Sullivan

Delta activity independent of its activity as a ligand of Notch

BMC Developmental Biology, 2005, Vol. 5 (): 6

Authors: Lee-Peng Mok, Tielin Qin, Boris Bardot, Matthew LeComte, Asal Homayouni, Francois Ahimou, and Cedric Wesley

Maspin alters the carcinoma proteome

The FASEB Journal, March 7, 2005, Vol. The FASEB Journal express article 10.1096/fj.04-2970fje. ()

Authors: Emily I. Chen, Laurence Florens, Fumiko T. Axelrod, Edward Monosov, Carlos F. Barbas III, John R. Yates III, Brunhilde Felding-Habermann, and Jeffrey W. Smith

Transcription factor gene expression profiling after acute intermittent nicotine treatment in the rat cerebral cortex

The Journal of Neuroscience, 2005, Vol. 133 (3): 787-796

Authors: N. Belluardo, P.A. Olsson, G. Mudo, W.H. Sommer, G. Amato and K. Fuxe

Expression of the Full-Length Form of gp2 of Equine Herpesvirus 1 (EHV-1) Completely Restores Respiratory Virulence to the Attenuated EHV-1 Strain KyA

J Virol., 2005, Vol. 79 (8): 5105-5115

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Recombinant erythropoietin down-regulates IL-6 and CXCR4 genes in TNF-α-treated primary cultures of human microvascular endothelial cells

Journal of Molecular Neuroscience, 2005, Vol. 25 (2): 183-189

Authors: Jagannadha R. Avasarala and Sastry S. Konduru

Gene expression profiling of E2F-1-induced apoptosis

Gene, 2005, Vol. 344 (): 67-77

Authors: Azemat Jamshidi-Parsian, Yanbin Dong, Xinyu Zheng, Heshan Sam Zhou, Wolfgang Zacharias and Kelly M. McMasters

Translation of a Small Subset of Caenorhabditis elegans mRNAs Is Dependent on a Specific Eukaryotic Translation Initiation Factor 4E Isoform

Molecular and Cellular Biology, 2005, Vol. 25 (1): 100-113

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Transcriptome and proteome expression in activated human CD4 and CD8 T-lymphocytes

Biochemical and Biophysical Research Communications, 2004, Vol. 324 (2): 692-696

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Dietary Olive Oil and Menhaden Oil Mitigate Induction of Lipogenesis in Hyperinsulinemic Corpulent JCR:LA-cp Rats: Microarray Analysis of Lipid-Relate

Endocrinology, 2004, Vol. 145 (12): 5847-5861

Authors: Xiong Deng, Marshall B. Elam, Henry G. Wilcox, Lauren M. Cagen, Edwards A. Park, Rajendra Raghow, Divyen Patel, Poonam Kumar, Ali Sheybani and James C. Russell

Gene expression profile of primary human CD34+CD38lo cells differentiating along the megakaryocyte lineage

Experimental Hematology, 2004, Vol. 32 (7): 638-648

Authors: Mi-Hyun Shim, Aubree Hoover, Noel Blake, Jonathan G. Drachman and Jo Anna Reems

Role of Viral Vectors and Virion Shells in Cellular Gene Expression

Journal of Molecular Therapy, 2004, Vol. 9 (3): 337-346

Authors: Jackie L. Stilwell and Richard Jude Samulski

GPR87 is an overexpressed G-protein coupled receptor in squamous cell carcinoma of the lung

Disease Markers, 2008, Vol. 24 (1): 41-50

Authors: Mathias Gugger, Richard White, Susan Song, Bea Waser, Renzo Cescato, Pierre Rivičre, Jean Claude Reubi

The Postimplantation Embryo Differentially Regulates Endometrial Gene Expression and Decidualization

Endocrinology, 2007, Vol. 148 (9): 4173-4184

Authors: Aki Kashiwagi, Carla M. DiGirolamo, Yoshiaki Kanda, Yuichi Niikura, Charles T. Esmon, Thomas R. Hansen, Toshi Shioda and James K. Pru

Gene Expression Profiles in Idiopathic Dilated Cardiomyopathies, a Validation Study

Journal of Cardiac Failure, 2007, Vol. 13 (6): S109

Authors: Mohammad Sarraf, Brian D. Lowes, Andreas Brieke, JoAnn Lindenfeld, Norman Gray, Simon Shakar, Eugene Wolfel, Joe Cleveland and Michael R. Bristow

Inhibition of CINC-1 Decreases Right Ventricular Damage Caused by Experimental Pulmonary Embolism in Rats1

The Journal of Immunology, 2007, Vol. 179 (11): 7820-7826

Authors: John Zagorski, Michael A. Gellar, Maria Obraztsova, Jeffrey A. Kline and John A. Watts

UNIT 7.1 Analysis of Expression Data: An Overview

Current Protocols in Bioinformatics, March 2007, Vol. DOI: 10.1002/0471250953.bi0701s17 ()

Authors: Anoop Grewal, Peter Lambert, and Jordan Stockton

Hierarchical gene expression profiles of HUVEC stimulated by different lipid A structures obtained from Porphyromonas gingivalis and Escherichia coli

Cellular Microbiology, April 2007, Vol. Cellular Microbiology, Volume 9, Number 4, April 2007 , pp. 1028-1038(11) ()

Authors: Chen, Casey; Coats, Stephen R.; Bumgarner, Roger E.; Darveau, Richard P.

Chemopreventive Agents Alters Global Gene Expression Pattern: Predicting their Mode of Action and Targets

Current Cancer Drug Targets, December 2006, Vol. Current Cancer Drug Targets, Volume 6, Number 8, December 2006 , pp. 711-727(17) ()

Authors: Narayanan, Bhagavathi A.

Gene expression profile of multiple myeloma cell line treated by realgar.

Journal of Experimental and Clinical Cancer Research, June 2006, Vol. J Exp Clin Cancer Res. 2006 Jun;25(2):243-9. ()

Authors: Wang MC, Liu SX, Liu PB.

Cytosolic heat shock proteins and heme oxygenase-1 are preferentially induced in response to specific and localized intramitochondrial damage by tetra

Journal of Biochemical Pharmacology, March 14, 2006, Vol. Journal of Biochemical Pharmacology, Volume 72, Issue 1, 28 June 2006, Pages 80-90 ()

Authors: Han K. Ho, Yankai Jia, Kevin J. Coe, Qiuxia Gao, Catalin E. Doneanu, Zhonghua Hu, Theo K. Bammler, Richard P. Beyer, Nelson Fausto, Sam A. Bruschi and Sidney D. Nelson

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